| Course Type | Elective Course |
|---|
| Course Level | Bachelor's Degree |
|---|
| Year of Study | - |
|---|
| Semester | - |
|---|
| ECTS | 5 |
|---|
| Name of Lecturer(s) |
|
| Learning Outcomes |
At the end of this course, the students;
- Learn optical elements and sensors used in bright-field microscopes.
- Acquire knowledge of diffraction, reflection, polarization techniques and calculate optical resolution.
- Learn working principles of fluorescence, phase and dark-field microscopes.
- Know quantum processes employed in optical microscopes.
- Learn advanced microscopy techniques such as 4PI, STED, 2-Photon, and confocal.
- Read patents about advanced microscopy techniques.
|
| Mode of Delivery | Face to face |
|---|
| Prerequisites | No |
|---|
| Recommended Optional Programme Components | |
|---|
| Course Description | In this course, optical and electronic designs in microscopy as well as the biomedical applications of novel and advanced micro/nano visualization techniques are covered. |
|---|
| Course Contents |
| WEEK |
TOPICS |
|
1st Week |
Fundamentals of microscopy |
|
2nd Week |
light and color |
|
3rd Week |
Illumination, filtering, imaging tools in microscopy |
|
4th Week |
Geometric optical design |
|
5th Week |
Diffraction and interference |
|
6th Week |
Bright field, phase contrast and dark field imaging |
|
7th Week |
polarization microscope |
|
8th Week |
MIDTERM EXAM WEEK |
|
9th Week |
fluorescence microscope |
|
10th Week |
Confocal scanning microscope |
|
11th Week |
Advanced microscopy techniques |
|
12th Week |
New microscopy techniques |
|
13th Week |
Image processing for microscopy |
|
14th Week |
acoustic microscopy |
|
| Recommended or Required Reading | Fundamentals of light microscopy and electronic imaging, D.B. Murphyö Willey 2001
Optical nanoscopy and novel microscopy techniques, P.Xi, CRC Press, 2014 |
|---|
| Planned Learning Activities and Teaching Methods |
- Lecture
- Discussion
- Questions/Answers
- Problem Solving
- Project
- Report Preparation
- Presentation
|
|---|
| Assessment Methods and Criteria |
|
Quantity |
Percentage (%) |
| Mid-term |
1 |
20 |
| Assignment |
1 |
10 |
| Practice |
1 |
15 |
| Project |
1 |
25 |
| Total(%) |
|
70 |
| Contribution of In-term Studies to Overall Grade(%) |
|
70 |
| Contribution of Final Examination to Overall Grade(%) |
|
30 |
| Total(%) |
|
100 |
|
| ECTS Allocated Based on Student Workload |
| Activities |
Quantity |
Duration (Hour) |
Total Workload (Hour) |
| Midterm exam |
1 |
2 |
2 |
| Preparation for Quiz |
|
|
|
| Individual or group work |
14 |
1 |
14 |
| Preparation for Final exam |
1 |
18 |
18 |
| Course hours |
14 |
3 |
42 |
| Preparation for Midterm exam |
1 |
12 |
12 |
| Laboratory (including preparation) |
14 |
1 |
14 |
| Final exam |
1 |
2 |
2 |
| Homework |
5 |
10 |
50 |
| Total Work Load | 154 |
| Total Work Load / 30 (h) | 5.13 |
| ECTS Credit of the Course | 5 |
|
| Language of Instruction | Turkish |
|---|
| Work Placement(s) | No |
|---|
